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1

From Single Genes to Co-Expression Networks: Extracting Knowledge from Barley Functional Genomics

P. Faccioli, P. Provero, C. Herrmann, A. M. Stanca, C. Morcia, V. Terzi

Journal:

Plant Molecular Biology

Year:

2005

Language:

english

File:

PDF, 322 KB

english, 2005

2

An Integrated Genome-wide CRISPRa Approach to Functionalize lncRNAs in Drug Resistance

Bester, Assaf C., Lee, Jonathan D., Chavez, Alejandro, Lee, Yu-Ru, Nachmani, Daphna, Vora, Suhani, Victor, Joshua, Sauvageau, Martin, Monteleone, Emanuele, Rinn, John L., Provero, Paolo, Church, Georg

Journal:

Year:

2018

Language:

english

File:

PDF, 3.96 MB

english, 2018

3

A comparison of machine learning techniques for survival prediction in breast cancer

Leonardo Vanneschi, Antonella Farinaccio, Giancarlo Mauri, Mauro Antoniotti, Paolo Provero, Mario Giacobini

Journal:

Year:

2011

Language:

english

File:

PDF, 315 KB

english, 2011

4

When QCD strings can break

F. Gliozzi, P. Provero

Journal:

Nuclear Physics B - Proceedings Supplements

Year:

2000

Language:

english

File:

PDF, 248 KB

english, 2000

5

Minimum physical length and the generalized uncertainty principle in string theory

Kenichi Konishi, Giampiero Paffuti, Paolo Provero

Journal:

Physics Letters B

Year:

1990

Language:

english

File:

PDF, 429 KB

english, 1990

6

IRF4 Mediates the Oncogenic Effects of STAT3 in Anaplastic Large Cell Lymphomas

Bandini, Cecilia, Pupuleku, Aldi, Spaccarotella, Elisa, Pellegrino, Elisa, Wang, Rui, Vitale, Nicoletta, Duval, Carlotta, Cantarella, Daniela, Rinaldi, Andrea, Provero, Paolo, Di Cunto, Ferdinando, Me

Journal:

Year:

2018

Language:

english

File:

PDF, 3.30 MB

english, 2018

7

Valley singularities and baryon number violation

Journal:

Physics Letters B

Year:

1994

Language:

english

File:

PDF, 272 KB

english, 1994

8

Capillary wave approach to order-order fluid interfaces in the 3D three-state Potts model

Paolo Provero, Stefano Vinti

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

1994

Language:

english

File:

PDF, 699 KB

english, 1994

9

Generalized two-dimensional Yang-Mills theory is a matrix string theory

M. Billò, M. Caselle, A. D'Adda, P. Provero

Journal:

Nuclear Physics B - Proceedings Supplements

Year:

2000

Language:

english

File:

PDF, 840 KB

english, 2000

10

Non-perturbative states in the three-dimensional /gf4 theory

M. Caselle, M. Hasenbusch, P. Provero

Journal:

Nuclear Physics B - Proceedings Supplements

Year:

2000

Language:

english

File:

PDF, 211 KB

english, 2000

11

Bound states in the 3d Ising model and implications for QCD at finite temperature and density

M. Caselle, M. Hasenbusch, P. Provero, K. Zarembo

Journal:

Nuclear Physics B - Proceedings Supplements

Year:

2002

Language:

english

File:

PDF, 199 KB

english, 2002

12

Finite-size scaling and deconfinement transition in gauge theories

Roberto Fiore, Alessandro Papa, Paolo Provero

Journal:

Nuclear Physics B - Proceedings Supplements

Year:

2002

Language:

english

File:

PDF, 212 KB

english, 2002

13

Spectrum of screening masses in the (3+1)D SU(2) pure gauge theory near the critical temperature

Roberto Fiore, Alessandro Papa, Paolo Provero

Journal:

Nuclear Physics B - Proceedings Supplements

Year:

2003

Language:

english

File:

PDF, 271 KB

english, 2003

14

String effects in Polyakov loop correlators

M. Caselle, M. Hasenbusch, M. Panero, P. Provero

Journal:

Nuclear Physics B - Proceedings Supplements

Year:

2003

Language:

english

File:

PDF, 260 KB

english, 2003

15

Percolating cluster of center vortices and confinement

Ferdinando Gliozzi, Marco Panero, Paolo Provero

Journal:

Nuclear Physics B - Proceedings Supplements

Year:

2003

Language:

english

File:

PDF, 276 KB

english, 2003

16

Estimating the number of integrations in transformed plants by quantitative real-time PCR

Giovanna Mason, Paolo Provero, Anna Maria Vaira, Gian Paolo Accotto

Journal:

BMC Biotechnology

Year:

2002

Language:

english

File:

PDF, 1.72 MB

english, 2002

17

Two-Dimensional Gauge Theories of the Symmetric GroupSnin the Large-nLimit

A. D’Adda, P. Provero

Journal:

Communications in Mathematical Physics

Year:

2004

Language:

english

File:

PDF, 277 KB

english, 2004

18

A combined strategy of “in silico” transcriptome analysis and web search engine optimization allows an agile identification of reference genes suitable for normalization in gene expression studies

Primetta Faccioli, Gian Paolo Ciceri, Paolo Provero, Antonio Michele Stanca, Caterina Morcia, Valeria Terzi

Journal:

Plant Molecular Biology

Year:

2007

Language:

english

File:

PDF, 231 KB

english, 2007

19

ORTom: a multi-species approach based on conserved co-expression to identify putative functional relationships among genes in tomato

Laura Miozzi, Paolo Provero, Gian Paolo Accotto

Journal:

Plant Molecular Biology

Year:

2010

Language:

english

File:

PDF, 622 KB

english, 2010

20

Two-dimensional gauge theories of the symmetric group Sn and branched n-coverings of Riemann surfaces in the large-n limit

A. D'Adda, P. Provero

Journal:

Nuclear Physics B - Proceedings Supplements

Year:

2002

Language:

english

File:

PDF, 463 KB

english, 2002

21

Critical correlators of three-dimensional gauge theories at finite temperature: exact results from universality

R. Fiore, F. Gliozzi, P. Provero

Journal:

Nuclear Physics B - Proceedings Supplements

Year:

1999

Language:

english

File:

PDF, 171 KB

english, 1999

22

Securin and Separase Modulate Membrane Traffic by Affecting Endosomal Acidification

Marina Bacac, Carlo Fusco, Anne Planche, Jaime Santodomingo, Nicolas Demaurex, Ruzanna Leemann-Zakaryan, Paolo Provero, Ivan Stamenkovic

Journal:

Year:

2011

Language:

english

File:

PDF, 1.28 MB

english, 2011

23

Generation of Functional Hepatocytes From Mouse Germ Line Cell-Derived Pluripotent Stem Cells In Vitro

Fagoonee, Sharmila, Hobbs, Robin M., De Chiara, Letizia, Cantarella, Daniela, Piro, Rosario M., Tolosano, Emanuela, Medico, Enzo, Provero, Paolo, Pandolfi, Pier Paolo, Silengo, Lorenzo

Journal:

Stem Cells and Development

Year:

2010

Language:

english

File:

PDF, 911 KB

english, 2010

24

Critical boundary conditions for the effective string

M. Caselle, R. Fiore, F. Gliozzi, P. Provero, S. Vinti

Journal:

Physics Letters B

Year:

1991

Language:

english

File:

PDF, 356 KB

english, 1991

25

Finite size effects in fluid interfaces

M. Caselle, F. Gliozzi, P. Provero, S. Vinti

Journal:

Nuclear Physics B - Proceedings Supplements

Year:

1994

Language:

english

File:

PDF, 206 KB

english, 1994

26

A TARBP2-Dependent miRNA Expression Profile Underlies Cancer Stem Cell Properties and Provides Candidate Therapeutic Reagents in Ewing Sarcoma

Claudio De Vito, Nicolo Riggi, Sandrine Cornaz, Mario-Luca Suvà, Karine Baumer, Paolo Provero, Ivan Stamenkovic

Journal:

Year:

2012

Language:

english

File:

PDF, 1.68 MB

english, 2012

27

p130Cas promotes invasiveness of three-dimensional ErbB2-transformed mammary acinar structures by enhanced activation of mTOR/p70S6K and Rac1

Giusy Tornillo, Brigitte Bisaro, Maria del Pilar Camacho-Leal, Mirco Galiè, Paolo Provero, Paola Di Stefano, Emilia Turco, Paola Defilippi, Sara Cabodi

Journal:

European Journal of Cell Biology

Year:

2011

Language:

english

File:

PDF, 1.68 MB

english, 2011

28

Quantum fluctuations of the color flux tube

Journal:

Nuclear Physics B - Proceedings Supplements

Year:

1997

Language:

english

File:

PDF, 190 KB

english, 1997

29

Spectrum of the gauge Ising model in three dimensions

M. Caselle, M. Hasenbusch, P. Provero

Journal:

Nuclear Physics B - Proceedings Supplements

Year:

1998

Language:

english

File:

PDF, 251 KB

english, 1998

30

Correlating overrepresented upstream motifs to gene expression: a computational approach to regulatory element discovery in eukaryotes

Michele Caselle, Ferdinando Di Cunto, Paolo Provero

Journal:

BMC Bioinformatics

Year:

2002

Language:

english

File:

PDF, 607 KB

english, 2002

31

CLOE: Identification of putative functional relationships among genes by comparison of expression profiles between two species

Maurizio Pellegrino, Paolo Provero, Lorenzo Silengo, Ferdinando Di Cunto

Journal:

BMC Bioinformatics

Year:

2004

Language:

english

File:

PDF, 326 KB

english, 2004

32

Computational identification of transcription factor binding sites by functional analysis of sets of genes sharing overrep-resented upstream motifs

Davide Corà, Ferdinando Di Cunto, Paolo Provero, Lorenzo Silengo, Michele Caselle

Journal:

BMC Bioinformatics

Year:

2004

Language:

english

File:

PDF, 316 KB

english, 2004

33

Ab initio identification of putative human transcription factor binding sites by comparative genomics

D Corà, C Herrmann, C Dieterich, F Di Cunto, P Provero, M Caselle

Journal:

BMC Bioinformatics

Year:

2005

Language:

english

File:

PDF, 317 KB

english, 2005

34

Identification of candidate regulatory sequences in mammalian 3' UTRs by statistical analysis of oligonucleotide distributions

Davide Corà, Ferdinando Di Cunto, Michele Caselle, Paolo Provero

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 381 KB

english, 2007

35

Identification of functional TFAP2A and SP1 binding sites in new TFAP2A-modulated genes

Francesca Orso, Davide Corà, Benedetta Ubezio, Paolo Provero, Michele Caselle, Daniela Taverna

Journal:

Year:

2010

Language:

english

File:

PDF, 3.54 MB

english, 2010

36

The 2D effective field theory of interfaces derived from 3D field theory

Paolo Provero, Stefano Vinti

Journal:

Nuclear Physics B

Year:

1995

Language:

english

File:

PDF, 253 KB

english, 1995

37

Coding-Independent Regulation of the Tumor Suppressor PTEN by Competing Endogenous mRNAs

Yvonne Tay, Lev Kats, Leonardo Salmena, Dror Weiss, Shen Mynn Tan, Ugo Ala, Florian Karreth, Laura Poliseno, Paolo Provero, Ferdinando Di Cunto, Judy Lieberman, Isidore Rigoutsos, Pier Paolo Pandolfi

Journal:

Year:

2011

Language:

english

File:

PDF, 2.03 MB

english, 2011

38

Non-supersymmetric matrix strings from generalized Yang–Mills theory on arbitrary Riemann surfaces

M. Billó, A. D'Adda, P. Provero

Journal:

Nuclear Physics B

Year:

2000

Language:

english

File:

PDF, 305 KB

english, 2000

39

Branched coverings and interacting matrix strings in two dimensions

M. Billó, A. D'Adda, P. Provero

Journal:

Nuclear Physics B

Year:

2001

Language:

english

File:

PDF, 260 KB

english, 2001

40

Bound states and glueballs in three-dimensional Ising systems

M. Caselle, M. Hasenbusch, P. Provero, K. Zarembo

Journal:

Nuclear Physics B

Year:

2002

Language:

english

File:

PDF, 170 KB

english, 2002

41

String effects in the Wilson loop: a high precision numerical test

M. Caselle, R. Fiore, F. Gliozzi, M. Hasenbusch, P. Provero

Journal:

Nuclear Physics B

Year:

1997

Language:

english

File:

PDF, 777 KB

english, 1997

42

Matrix string states in pure 2d Yang-Mills theories

M. Billó, M. Caselle, A. D'Adda, P. Provero

Journal:

Nuclear Physics B

Year:

1999

Language:

english

File:

PDF, 1.40 MB

english, 1999

43

The confining string and its breaking in QCD

F. Gliozzia, P. Provero

Journal:

Nuclear Physics B

Year:

1999

Language:

english

File:

PDF, 712 KB

english, 1999

44

Non-perturbative states in the 3D φ4 theory

M. Caselle, M. Hasenbusch, P. Provero

Journal:

Nuclear Physics B

Year:

1999

Language:

english

File:

PDF, 1.12 MB

english, 1999

45

835 Improving the Reliability of Gene Expression Profiles From FFPE Samples Using Alternative Chip Description Files

M. Callari, A. Lembo, G. Bianchini, V. Cappelletti, M.G. Daidone, P. Provero

Journal:

European Journal of Cancer

Year:

2012

Language:

english

File:

PDF, 52 KB

english, 2012

46

miR148b is a major coordinator of breast cancer progression in a relapse-associated microRNA signature by targeting ITGA5, ROCK1, PIK3CA, NRAS, and CSF1

Cimino, D., De Pitta, C., Orso, F., Zampini, M., Casara, S., Penna, E., Quaglino, E., Forni, M., Damasco, C., Pinatel, E., Ponzone, R., Romualdi, C., Brisken, C., De Bortoli, M., Biglia, N., Provero,

Journal:

The FASEB Journal

Year:

2013

Language:

english

File:

PDF, 714 KB

english, 2013

47

Integrated transcriptional and competitive endogenous RNA networks are cross-regulated in permissive molecular environments

Ala, U., Karreth, F. A., Bosia, C., Pagnani, A., Taulli, R., Leopold, V., Tay, Y., Provero, P., Zecchina, R., Pandolfi, P. P.

Journal:

Proceedings of the National Academy of Sciences

Year:

2013

Language:

english

File:

PDF, 491 KB

english, 2013

48

Genome-wide signatures of convergent evolution in echolocating mammals

Parker, Joe, Tsagkogeorga, Georgia, Cotton, James A., Liu, Yuan, Provero, Paolo, Stupka, Elia, Rossiter, Stephen J.

Journal:

Year:

2013

Language:

english

File:

PDF, 527 KB

english, 2013

49

Identification of Functional cis -regulatory Polymorphisms in the Human Genome

Molineris, Ivan, Schiavone, Davide, Rosa, Fabio, Matullo, Giuseppe, Poli, Valeria, Provero, Paolo

Journal:

Year:

2013

Language:

english

File:

PDF, 360 KB

english, 2013

50

Drug repositioning for orphan genetic diseases through Conserved Anticoexpressed Gene Clusters (CAGCs)

Molineris, Ivan, Ala, Ugo, Provero, Paolo, Di Cunto, Ferdinando

Journal:

BMC Bioinformatics

Year:

2013

Language:

english

File:

PDF, 548 KB

english, 2013